Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated-like protein | B0O44_10793 | Not Available | Positive | 4277636 - 4278388 | 28109.8 |
| type ix secretion system porp/sprf family membrane protein | B0O44_10794 | Not Available | Positive | 4278424 - 4279341 | 34122.1 |
| dna-3-methyladenine glycosylase ii | B0O44_10795 | Not Available | Positive | 4279398 - 4280306 | 35134.7 |
| hypothetical protein | B0O44_10796 | Not Available | Negative | 4280314 - 4281015 | 26454.1 |
| arac family transcriptional regulator of adaptative response/methylated-dna-[protein]-cysteine methyltransferase | B0O44_10797 | Not Available | Negative | 4281015 - 4281860 | 31219.4 |
| atp-binding cassette subfamily b protein | B0O44_10798 | Not Available | Positive | 4282047 - 4283786 | 63794.4 |
| atp-binding cassette subfamily b protein | B0O44_10799 | Not Available | Positive | 4283767 - 4285530 | 65079.7 |
| hypothetical protein | B0O44_107100 | Not Available | Positive | 4285530 - 4285880 | 14033.7 |
| hypothetical protein | B0O44_107101 | Not Available | Positive | 4285880 - 4286251 | 14393.5 |
| putative hydrolase of the had superfamily | B0O44_107102 | Not Available | Negative | 4286253 - 4286897 | 23879.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

