Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rtec protein | B0O44_10773 | Not Available | Positive | 4230510 - 4231337 | 33068.6 |
| hd domain-containing protein | B0O44_10774 | Not Available | Positive | 4231386 - 4231979 | 22919.0 |
| helicase-like protein | B0O44_10775 | Not Available | Negative | 4232041 - 4237548 | 207727.0 |
| uncharacterized protein duf1896 | B0O44_10776 | Not Available | Negative | 4237538 - 4237972 | 16690.6 |
| orf6n domain-containing protein | B0O44_10777 | Not Available | Negative | 4238111 - 4238992 | 33445.4 |
| dna topoisomerase-3 | B0O44_10778 | Not Available | Negative | 4238989 - 4241070 | 77844.9 |
| uncharacterized protein duf3945 | B0O44_10779 | Not Available | Negative | 4241088 - 4242575 | 56501.8 |
| helix-turn-helix protein | B0O44_10780 | Not Available | Negative | 4242662 - 4242970 | 12370.9 |
| helix-turn-helix protein | B0O44_10781 | Not Available | Negative | 4242986 - 4243336 | 13682.4 |
| rtec protein | B0O44_10782 | Not Available | Negative | 4243599 - 4244447 | 33171.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

