Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-zinc-cadmium resistance protein czca | B0O44_10763 | Not Available | Positive | 4217959 - 4222290 | 158241.0 |
| cobalt-zinc-cadmium efflux system membrane fusion protein | B0O44_10764 | Not Available | Positive | 4222293 - 4223459 | 42725.8 |
| thioredoxin-like protein | B0O44_10765 | Not Available | Positive | 4223502 - 4223945 | 16594.9 |
| thiamine biosynthesis lipoprotein | B0O44_10766 | Not Available | Positive | 4223947 - 4224873 | 34209.2 |
| uncharacterized protein duf4266 | B0O44_10767 | Not Available | Positive | 4224870 - 4225100 | 8100.75 |
| uncharacterized protein duf3570 | B0O44_10768 | Not Available | Positive | 4225119 - 4226324 | 45179.2 |
| heme-binding protein | B0O44_10769 | Not Available | Positive | 4226342 - 4226803 | 17599.2 |
| vit1/ccc1 family predicted fe2+/mn2+ transporter | B0O44_10770 | Not Available | Positive | 4226827 - 4227546 | 25473.0 |
| hypothetical protein | B0O44_10771 | Not Available | Negative | 4227597 - 4227800 | 7863.82 |
| ca2+-transporting atpase | B0O44_10772 | Not Available | Positive | 4227894 - 4230392 | 92100.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

