Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | B0O44_10753 | Not Available | Positive | 4208217 - 4208783 | 21048.9 |
| hypothetical protein | B0O44_10754 | Not Available | Positive | 4208780 - 4209235 | 17470.6 |
| quercetin dioxygenase-like cupin family protein | B0O44_10755 | Not Available | Positive | 4209245 - 4209580 | 12467.2 |
| glyoxalase-like protein | B0O44_10756 | Not Available | Positive | 4209604 - 4209996 | 14942.0 |
| omf family outer membrane factor | B0O44_10757 | Not Available | Positive | 4210027 - 4211352 | 50377.1 |
| rnd family efflux transporter mfp subunit | B0O44_10758 | Not Available | Positive | 4211377 - 4212432 | 37978.0 |
| hae1 family hydrophobic/amphiphilic exporter-1 | B0O44_10759 | Not Available | Positive | 4212444 - 4215542 | 114350.0 |
| uncharacterized protein (duf2141 family) | B0O44_10760 | Not Available | Positive | 4215546 - 4215995 | 16949.4 |
| rtec protein | B0O44_10761 | Not Available | Positive | 4216229 - 4217056 | 32879.0 |
| hypothetical protein | B0O44_10762 | Not Available | Positive | 4217294 - 4217677 | 14947.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

