Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_10743 | Not Available | Positive | 4198612 - 4199748 | 44127.6 |
| nucleoid associated protein ndpa | B0O44_10744 | Not Available | Positive | 4199752 - 4200798 | 40889.3 |
| uncharacterized protein (tigr02391 family) | B0O44_10745 | Not Available | Positive | 4200825 - 4201604 | 29501.3 |
| hypothetical protein | B0O44_10746 | Not Available | Negative | 4201624 - 4202262 | 23531.9 |
| uncharacterized protein duf3408 | B0O44_10747 | Not Available | Negative | 4202274 - 4202687 | 16172.1 |
| cellulose biosynthesis protein bcsq | B0O44_10748 | Not Available | Negative | 4202693 - 4203460 | 29104.3 |
| hypothetical protein | B0O44_10749 | Not Available | Positive | 4203560 - 4203739 | 6525.91 |
| hypothetical protein | B0O44_10750 | Not Available | Positive | 4204115 - 4204639 | 20027.3 |
| relaxase/mobilization nuclease-like protein | B0O44_10751 | Not Available | Positive | 4204636 - 4205940 | 49394.5 |
| type iv secretory system conjugative dna transfer vird4/trag family protein | B0O44_10752 | Not Available | Positive | 4206065 - 4208065 | 75726.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

