Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_10733 | Not Available | Negative | 4190991 - 4191419 | 15909.2 |
| conjugative transposon trak protein | B0O44_10734 | Not Available | Negative | 4191430 - 4192053 | 24219.0 |
| conjugative transposon traj protein | B0O44_10735 | Not Available | Negative | 4192065 - 4193039 | 35847.2 |
| uncharacterized protein duf4141 | B0O44_10736 | Not Available | Negative | 4193067 - 4193699 | 23730.8 |
| hypothetical protein | B0O44_10737 | Not Available | Negative | 4193762 - 4193977 | 8133.85 |
| conjugation system trag family atpase | B0O44_10738 | Not Available | Negative | 4193998 - 4196505 | 96061.5 |
| uncharacterized protein duf4133 | B0O44_10739 | Not Available | Negative | 4196502 - 4196834 | 12120.3 |
| uncharacterized protein duf4134 | B0O44_10740 | Not Available | Negative | 4196846 - 4197151 | 10669.1 |
| helix-turn-helix protein | B0O44_10741 | Not Available | Positive | 4197346 - 4197681 | 12982.9 |
| hypothetical protein | B0O44_10742 | Not Available | Positive | 4197702 - 4198607 | 34556.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

