Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| organic hydroperoxide reductase osmc/ohra | B0O44_10723 | Not Available | Negative | 4184279 - 4184713 | 15949.4 |
| hypothetical protein | B0O44_10724 | Not Available | Negative | 4184830 - 4185627 | 28298.3 |
| crp/fnr family transcriptional regulator | B0O44_10725 | Not Available | Negative | 4185689 - 4186312 | 23763.1 |
| hypothetical protein | B0O44_10726 | Not Available | Positive | 4186633 - 4186890 | 9777.5 |
| response regulator receiver domain-containing protein | B0O44_10727 | Not Available | Positive | 4186903 - 4187334 | 15780.7 |
| uncharacterized protein duf3872 | B0O44_10728 | Not Available | Negative | 4187421 - 4187855 | 16938.9 |
| conjugative transposon protein trao | B0O44_10729 | Not Available | Negative | 4187867 - 4188424 | 20632.8 |
| conjugative transposon tran protein | B0O44_10730 | Not Available | Negative | 4188442 - 4189344 | 33960.0 |
| conjugative transposon tram protein | B0O44_10731 | Not Available | Negative | 4189372 - 4190703 | 48565.4 |
| hypothetical protein | B0O44_10732 | Not Available | Negative | 4190693 - 4190977 | 11129.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

