Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | B0O44_10713 | Not Available | Positive | 4178771 - 4179076 | 11720.1 |
| helix-turn-helix protein | B0O44_10714 | Not Available | Positive | 4179063 - 4179344 | 11125.5 |
| uncharacterized membrane protein yoak (upf0700 family) | B0O44_10715 | Not Available | Negative | 4179352 - 4180089 | 28067.1 |
| hypothetical protein | B0O44_10716 | Not Available | Negative | 4180417 - 4180917 | 18688.1 |
| hypothetical protein | B0O44_10717 | Not Available | Negative | 4180945 - 4181508 | 20340.5 |
| thioredoxin | B0O44_10718 | Not Available | Negative | 4181516 - 4181809 | 10914.3 |
| hypothetical protein | B0O44_10719 | Not Available | Negative | 4181996 - 4182229 | 8636.84 |
| hypothetical protein | B0O44_10720 | Not Available | Negative | 4182226 - 4182435 | 7623.97 |
| rhodanese-related sulfurtransferase | B0O44_10721 | Not Available | Negative | 4182443 - 4182763 | 11693.0 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | B0O44_10722 | Not Available | Negative | 4182790 - 4184199 | 51903.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

