Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family protein | B0O44_1073 | Not Available | Negative | 4167946 - 4168437 | 18761.9 |
| outer membrane receptor protein involved in fe transport | B0O44_1074 | Not Available | Negative | 4168455 - 4170899 | 91703.5 |
| macb-like protein | B0O44_1075 | Not Available | Positive | 4171239 - 4173629 | 88767.4 |
| dna-binding transcriptional regulator gbsr (marr family) | B0O44_1076 | Not Available | Positive | 4173694 - 4174200 | 19501.5 |
| site-specific recombinase xerd | B0O44_1077 | Not Available | Positive | 4174496 - 4175824 | 50978.1 |
| hypothetical protein | B0O44_1078 | Not Available | Negative | 4175858 - 4175986 | 4620.76 |
| phage/plasmid-like protein (tigr03299 family) | B0O44_1079 | Not Available | Positive | 4176472 - 4177545 | 39489.6 |
| hypothetical protein | B0O44_10710 | Not Available | Positive | 4177490 - 4178008 | 20013.8 |
| hypothetical protein | B0O44_10711 | Not Available | Positive | 4178060 - 4178251 | 7422.87 |
| hypothetical protein | B0O44_10712 | Not Available | Positive | 4178339 - 4178611 | 10445.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

