Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein recn (recombination protein n) | B0O44_106283 | Not Available | Negative | 4155150 - 4156814 | 62315.7 |
| beta-lactamase regulating signal transducer with metallopeptidase domain | B0O44_106284 | Not Available | Negative | 4156923 - 4158926 | 77874.9 |
| putative transcriptional regulator | B0O44_106285 | Not Available | Negative | 4158931 - 4159314 | 14556.6 |
| uncharacterized protein duf4835 | B0O44_106286 | Not Available | Negative | 4159404 - 4160303 | 34086.5 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | B0O44_106287 | Not Available | Negative | 4160396 - 4161595 | 43121.3 |
| rna polymerase rpb6 | B0O44_106288 | Not Available | Negative | 4161643 - 4161969 | 12496.6 |
| beta-barrel assembly machine subunit bamd | B0O44_106289 | Not Available | Negative | 4161969 - 4162901 | 36306.2 |
| hypothetical protein | B0O44_106290 | Not Available | Negative | 4163197 - 4163412 | 8207.2 |
| putative repeat protein (tigr01451 family)/gliding motility-associated-like protein | B0O44_1071 | Not Available | Positive | 4163909 - 4166815 | 103774.0 |
| type ix secretion system porp/sprf family membrane protein | B0O44_1072 | Not Available | Positive | 4166883 - 4167881 | 36803.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

