Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | B0O44_106253 | Not Available | Positive | 4118364 - 4119029 | 24664.8 |
| putative abc transport system permease protein | B0O44_106254 | Not Available | Positive | 4119039 - 4120274 | 46784.5 |
| putative abc transport system permease protein | B0O44_106255 | Not Available | Positive | 4120298 - 4121482 | 44385.0 |
| dna-binding ntrc family response regulator | B0O44_106256 | Not Available | Positive | 4121528 - 4122901 | 51084.1 |
| pas domain-containing protein | B0O44_106257 | Not Available | Positive | 4122843 - 4124150 | 49863.2 |
| outer membrane protein | B0O44_106258 | Not Available | Positive | 4124275 - 4125585 | 47905.1 |
| hlyd family secretion protein | B0O44_106259 | Not Available | Positive | 4125818 - 4127020 | 43381.0 |
| putative abc transport system atp-binding protein | B0O44_106260 | Not Available | Positive | 4127020 - 4127766 | 27461.1 |
| putative abc transport system permease protein | B0O44_106261 | Not Available | Positive | 4127779 - 4129002 | 43830.7 |
| histidine kinase | B0O44_106262 | Not Available | Positive | 4129043 - 4130110 | 42094.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

