Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional mocr family regulator | B0O44_106243 | Not Available | Negative | 4102610 - 4104037 | 52791.3 |
| ribosomal protein s18 acetylase rimi-like enzyme | B0O44_106244 | Not Available | Positive | 4104148 - 4104663 | 19356.0 |
| uncharacterized protein duf1572 | B0O44_106245 | Not Available | Positive | 4104729 - 4105181 | 17039.7 |
| gliding motility-associated-like protein | B0O44_106246 | Not Available | Positive | 4106307 - 4111502 | 180022.0 |
| type ix secretion system porp/sprf family membrane protein | B0O44_106247 | Not Available | Positive | 4111514 - 4112434 | 33450.8 |
| peptidase s41-like protein | B0O44_106248 | Not Available | Negative | 4112490 - 4113812 | 49661.6 |
| arac-like dna-binding protein | B0O44_106249 | Not Available | Positive | 4113903 - 4114724 | 30787.1 |
| start domain-containing protein | B0O44_106250 | Not Available | Negative | 4114733 - 4115377 | 24224.7 |
| hlyd family secretion protein | B0O44_106251 | Not Available | Positive | 4115558 - 4116859 | 48184.6 |
| outer membrane protein tolc | B0O44_106252 | Not Available | Positive | 4116871 - 4118340 | 55380.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

