Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix dna-binding protein | B0O44_106223 | Not Available | Positive | 4075681 - 4075983 | 11578.0 |
| inner membrane protein | B0O44_106224 | Not Available | Positive | 4076037 - 4077431 | 52513.4 |
| acetyltransferase (gnat) family protein | B0O44_106225 | Not Available | Negative | 4077473 - 4078027 | 21214.7 |
| gntr family transcriptional regulator | B0O44_106226 | Not Available | Positive | 4078121 - 4079545 | 53006.3 |
| gag-polyprotein putative aspartyl protease | B0O44_106227 | Not Available | Positive | 4079738 - 4080901 | 43393.0 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_106228 | Not Available | Positive | 4080910 - 4081974 | 40378.9 |
| hypothetical protein | B0O44_106229 | Not Available | Positive | 4082097 - 4082975 | 31462.4 |
| tetratricopeptide repeat protein | B0O44_106230 | Not Available | Negative | 4082989 - 4083456 | 18018.6 |
| hypothetical protein | B0O44_106231 | Not Available | Negative | 4083510 - 4083848 | 12898.0 |
| hypothetical protein | B0O44_106232 | Not Available | Negative | 4083953 - 4084534 | 20311.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

