Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmp synthase (glutamine-hydrolysing) | B0O44_106203 | Not Available | Positive | 4052090 - 4053619 | 56512.7 |
| substrate-binding family protein | B0O44_106204 | Not Available | Positive | 4053576 - 4054802 | 46155.5 |
| 16s rrna (cytosine967-c5)-methyltransferase | B0O44_106205 | Not Available | Positive | 4054799 - 4055962 | 44568.7 |
| multiple antibiotic resistance protein | B0O44_106206 | Not Available | Negative | 4056120 - 4056689 | 20687.3 |
| apa family basic amino acid/polyamine antiporter | B0O44_106207 | Not Available | Negative | 4056795 - 4058270 | 52908.6 |
| apa family basic amino acid/polyamine antiporter | B0O44_106208 | Not Available | Negative | 4058323 - 4059798 | 53059.7 |
| k(+)-stimulated pyrophosphate-energized sodium pump | B0O44_106209 | Not Available | Negative | 4059944 - 4062160 | 76353.9 |
| amino acid/polyamine/organocation transporter (apc superfamily) | B0O44_106210 | Not Available | Positive | 4062395 - 4063843 | 52502.1 |
| iron complex outermembrane receptor protein | B0O44_106211 | Not Available | Negative | 4063921 - 4066362 | 88831.2 |
| hypothetical protein | B0O44_106212 | Not Available | Negative | 4066453 - 4067274 | 30167.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

