Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoendopeptidase f | B0O44_106183 | Not Available | Negative | 4032032 - 4033747 | 66325.9 |
| 4-hydroxybenzoate polyprenyltransferase | B0O44_106184 | Not Available | Negative | 4033759 - 4034619 | 32240.2 |
| gtp-binding protein | B0O44_106185 | Not Available | Negative | 4034642 - 4035277 | 23945.1 |
| demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | B0O44_106186 | Not Available | Positive | 4035331 - 4036062 | 27487.3 |
| putative protein-translocating porin port | B0O44_106187 | Not Available | Positive | 4036084 - 4036848 | 29271.9 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | B0O44_106188 | Not Available | Positive | 4036896 - 4037660 | 27874.9 |
| hypothetical protein | B0O44_106189 | Not Available | Positive | 4037699 - 4038106 | 14697.0 |
| pimeloyl-acp methyl ester carboxylesterase | B0O44_106190 | Not Available | Positive | 4038215 - 4038979 | 29107.4 |
| cbs domain protein | B0O44_106191 | Not Available | Positive | 4038979 - 4039641 | 24729.6 |
| nad+ kinase | B0O44_106192 | Not Available | Positive | 4039863 - 4040744 | 32831.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

