Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_106173 | Not Available | Negative | 4021812 - 4022066 | 9225.29 |
| chromosome partitioning protein | B0O44_106174 | Not Available | Negative | 4022071 - 4022814 | 27311.2 |
| peroxiredoxin q/bcp | B0O44_106175 | Not Available | Negative | 4023176 - 4023637 | 17036.4 |
| peptidase m23-like protein | B0O44_106176 | Not Available | Negative | 4023649 - 4025370 | 63865.7 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | B0O44_106177 | Not Available | Negative | 4025376 - 4025987 | 23031.7 |
| putative secreted protein (por secretion system target) | B0O44_106178 | Not Available | Negative | 4026035 - 4026544 | 18903.2 |
| kup system potassium uptake protein | B0O44_106179 | Not Available | Positive | 4026743 - 4028695 | 72898.3 |
| hypothetical protein | B0O44_106180 | Not Available | Negative | 4028730 - 4029098 | 14341.3 |
| rna polymerase sigma factor (sigma-70 family) | B0O44_106181 | Not Available | Negative | 4029110 - 4029661 | 21890.7 |
| amino acid/polyamine/organocation transporter (apc superfamily) | B0O44_106182 | Not Available | Negative | 4029973 - 4031928 | 71508.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

