Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pria4b orf-3-like protein | B0O44_106153 | Not Available | Negative | 4001448 - 4002110 | 25673.8 |
| trna nucleotidyltransferase/poly(a) polymerase | B0O44_106154 | Not Available | Negative | 4002171 - 4003574 | 53524.2 |
| l-threonylcarbamoyladenylate synthase | B0O44_106155 | Not Available | Negative | 4003666 - 4004232 | 20896.1 |
| glycosyltransferase involved in cell wall biosynthesis | B0O44_106156 | Not Available | Negative | 4004226 - 4005365 | 43400.1 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | B0O44_106157 | Not Available | Negative | 4005366 - 4006184 | 29815.5 |
| heat shock protein hsp15 | B0O44_106158 | Not Available | Positive | 4006341 - 4006742 | 15332.6 |
| trna(arg) a34 adenosine deaminase tada | B0O44_106159 | Not Available | Negative | 4006789 - 4007271 | 17890.1 |
| periplasmic chaperone for outer membrane proteins skp | B0O44_106160 | Not Available | Negative | 4007349 - 4007948 | 21829.8 |
| dna gyrase subunit b | B0O44_106161 | Not Available | Positive | 4008177 - 4010135 | 72343.0 |
| aspartyl protease | B0O44_106162 | Not Available | Negative | 4010190 - 4010627 | 15917.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

