Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_106133 | Not Available | Negative | 3984508 - 3984897 | 14446.3 |
| small subunit ribosomal protein s21 | B0O44_106134 | Not Available | Positive | 3985090 - 3985284 | 7580.4 |
| integrase/recombinase xerc | B0O44_106135 | Not Available | Positive | 3985431 - 3986315 | 33520.4 |
| putative sigma-54 modulation protein | B0O44_106136 | Not Available | Positive | 3986330 - 3986677 | 13220.9 |
| Trna-thr | Not Available | Not Available | Positive | 3986878 - 3986950 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3986990 - 3987075 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3987084 - 3987156 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 3987239 - 3987310 | Not Available |
| elongation factor tu | B0O44_106141 | Not Available | Positive | 3987431 - 3988618 | 42984.9 |
| Trna-trp | Not Available | Not Available | Positive | 3988721 - 3988794 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

