Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide/colanic/teichoic acid biosynthesis glycosyltransferase | B0O44_101339 | Not Available | Positive | 412032 - 413108 | 41304.4 |
| outer membrane efflux protein | B0O44_101340 | Not Available | Positive | 413134 - 413814 | 25726.9 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | B0O44_101341 | Not Available | Positive | 413836 - 416004 | 81257.9 |
| o-antigen ligase-like membrane protein | B0O44_101342 | Not Available | Positive | 416146 - 417588 | 54360.8 |
| glycosyltransferase involved in cell wall biosynthesis | B0O44_101343 | Not Available | Positive | 417734 - 418945 | 47101.6 |
| cellulose synthase/poly-beta-1,6-n-acetylglucosamine synthase-like glycosyltransferase | B0O44_101344 | Not Available | Positive | 418968 - 420134 | 44479.5 |
| glycosyltransferase involved in cell wall biosynthesis | B0O44_101345 | Not Available | Positive | 420212 - 421318 | 41616.0 |
| peptidoglycan/lps o-acetylase oafa/yrhl | B0O44_101346 | Not Available | Positive | 421328 - 422344 | 39005.9 |
| gluconate 2-dehydrogenase subunit 3-like protein | B0O44_101347 | Not Available | Positive | 422355 - 422921 | 21627.1 |
| choline dehydrogenase-like flavoprotein | B0O44_101348 | Not Available | Positive | 422928 - 424622 | 63813.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

