Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | B0O44_106123 | Not Available | Positive | 3970690 - 3973884 | 117098.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_106124 | Not Available | Positive | 3973894 - 3975312 | 52907.5 |
| hypothetical protein | B0O44_106125 | Not Available | Positive | 3975742 - 3976452 | 25935.8 |
| hypothetical protein | B0O44_106126 | Not Available | Positive | 3976462 - 3977571 | 41302.7 |
| hypothetical protein | B0O44_106127 | Not Available | Positive | 3977599 - 3978594 | 36523.8 |
| putative hemolysin | B0O44_106128 | Not Available | Negative | 3978833 - 3980584 | 66952.9 |
| competence comea-like helix-hairpin-helix protein | B0O44_106129 | Not Available | Positive | 3980766 - 3981659 | 34415.9 |
| adenine phosphoribosyltransferase | B0O44_106130 | Not Available | Positive | 3981662 - 3982189 | 18912.3 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | B0O44_106131 | Not Available | Positive | 3982379 - 3983551 | 42618.2 |
| outer membrane protein with beta-barrel domain | B0O44_106132 | Not Available | Positive | 3983828 - 3984445 | 22602.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

