Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s20 | B0O44_106113 | Not Available | Positive | 3957907 - 3958161 | 9656.1 |
| dna repair protein radc | B0O44_106114 | Not Available | Positive | 3958222 - 3958920 | 25615.5 |
| phenylalanyl-trna synthetase beta subunit | B0O44_106115 | Not Available | Positive | 3958958 - 3961357 | 88021.5 |
| hypothetical protein | B0O44_106116 | Not Available | Positive | 3961400 - 3961690 | 10864.3 |
| cell division protein zapa | B0O44_106117 | Not Available | Positive | 3961723 - 3962013 | 11116.2 |
| ribonuclease y | B0O44_106118 | Not Available | Positive | 3962302 - 3963855 | 58100.4 |
| putative membrane protein ygl010w | B0O44_106119 | Not Available | Positive | 3963970 - 3964470 | 19235.2 |
| carboxypeptidase family protein | B0O44_106120 | Not Available | Positive | 3964758 - 3968057 | 121920.0 |
| nlpc/p60 family protein | B0O44_106121 | Not Available | Positive | 3968250 - 3969503 | 46201.9 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | B0O44_106122 | Not Available | Positive | 3969500 - 3970639 | 42160.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

