Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | B0O44_106103 | Not Available | Negative | 3946997 - 3947587 | 21715.3 |
| hypothetical protein | B0O44_106104 | Not Available | Positive | 3947689 - 3948783 | 41210.5 |
| rod shape determining protein roda | B0O44_106105 | Not Available | Negative | 3948776 - 3950041 | 47162.4 |
| penicillin-binding protein 2 | B0O44_106106 | Not Available | Negative | 3950038 - 3951990 | 72708.5 |
| hypothetical protein | B0O44_106107 | Not Available | Negative | 3951990 - 3952505 | 19793.0 |
| rod shape-determining protein mrec | B0O44_106108 | Not Available | Negative | 3952498 - 3953337 | 31356.8 |
| rod shape-determining protein mreb | B0O44_106109 | Not Available | Negative | 3953416 - 3954438 | 36814.1 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | B0O44_106110 | Not Available | Negative | 3954536 - 3956062 | 55890.8 |
| phosphoribosylglycinamide formyltransferase-1 | B0O44_106111 | Not Available | Negative | 3956123 - 3956701 | 22083.6 |
| uncharacterized protein yxji | B0O44_106112 | Not Available | Negative | 3956975 - 3957562 | 22385.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

