Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m28-like protein | B0O44_10673 | Not Available | Positive | 3914306 - 3915616 | 48795.8 |
| substrate-binding family protein | B0O44_10674 | Not Available | Positive | 3915627 - 3916658 | 39237.8 |
| iron complex outermembrane receptor protein | B0O44_10675 | Not Available | Positive | 3916728 - 3918623 | 70191.8 |
| hypothetical protein | B0O44_10676 | Not Available | Negative | 3918627 - 3919346 | 28365.9 |
| putative outer membrane starch-binding protein | B0O44_10677 | Not Available | Negative | 3919795 - 3921363 | 58021.0 |
| tonb-linked susc/raga family outer membrane protein | B0O44_10678 | Not Available | Negative | 3921386 - 3924490 | 113858.0 |
| hypothetical protein | B0O44_10679 | Not Available | Negative | 3924644 - 3925000 | 14219.0 |
| single-strand dna-binding protein | B0O44_10680 | Not Available | Positive | 3925159 - 3925503 | 12931.2 |
| iron complex outermembrane receptor protein | B0O44_10681 | Not Available | Negative | 3925490 - 3927550 | 76745.8 |
| isocitrate dehydrogenase (nadp) | B0O44_10682 | Not Available | Negative | 3927871 - 3929106 | 46431.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

