Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | B0O44_10643 | Not Available | Positive | 3866533 - 3867549 | 37786.6 |
| hypothetical protein | B0O44_10644 | Not Available | Positive | 3867717 - 3869138 | 53727.1 |
| glucokinase | B0O44_10645 | Not Available | Positive | 3869190 - 3870077 | 32508.2 |
| putative alpha-1,2-mannosidase | B0O44_10646 | Not Available | Positive | 3870112 - 3872400 | 85973.8 |
| alginate lyase | B0O44_10647 | Not Available | Negative | 3872561 - 3873748 | 44969.6 |
| regulatory luxr family protein | B0O44_10648 | Not Available | Positive | 3873928 - 3876849 | 112463.0 |
| tonb-linked susc/raga family outer membrane protein | B0O44_10649 | Not Available | Positive | 3877053 - 3880211 | 114284.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_10650 | Not Available | Positive | 3880223 - 3881752 | 56249.9 |
| glucosylceramidase | B0O44_10651 | Not Available | Positive | 3881815 - 3883308 | 56230.9 |
| carbohydrate binding protein with cbm6 domain | B0O44_10652 | Not Available | Positive | 3883332 - 3885089 | 66003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

