Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha-1,2-mannosidase | B0O44_10633 | Not Available | Positive | 3854901 - 3857201 | 85599.0 |
| beta-galactosidase/beta-glucuronidase | B0O44_10634 | Not Available | Positive | 3857202 - 3859853 | 100348.0 |
| drug/metabolite transporter (dmt)-like permease | B0O44_10635 | Not Available | Negative | 3859934 - 3860878 | 34204.6 |
| lrp/asnc family leucine-responsive transcriptional regulator | B0O44_10636 | Not Available | Negative | 3860891 - 3861370 | 17783.9 |
| inner membrane transporter rhta | B0O44_10637 | Not Available | Positive | 3861541 - 3862395 | 29705.1 |
| hypothetical protein | B0O44_10638 | Not Available | Positive | 3862549 - 3863145 | 22217.3 |
| uncharacterized protein duf4397 | B0O44_10639 | Not Available | Positive | 3863280 - 3863990 | 25015.0 |
| acetyltransferase (gnat) family protein | B0O44_10640 | Not Available | Negative | 3864013 - 3864858 | 31412.8 |
| cephalosporin-c deacetylase-like acetyl esterase | B0O44_10641 | Not Available | Positive | 3865021 - 3866232 | 45579.4 |
| hypothetical protein | B0O44_10642 | Not Available | Positive | 3866352 - 3866531 | 6441.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

