Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | B0O44_101329 | Not Available | Positive | 403435 - 404526 | 41594.0 |
| response regulator receiver domain-containing protein | B0O44_101330 | Not Available | Positive | 404610 - 405056 | 16639.8 |
| oop family ompa-ompf porin | B0O44_101331 | Not Available | Negative | 405205 - 406545 | 48040.7 |
| metallo-beta-lactamase family protein | B0O44_101332 | Not Available | Negative | 406769 - 408160 | 52005.9 |
| nucleoside-diphosphate-sugar epimerase | B0O44_101333 | Not Available | Negative | 408157 - 409044 | 32792.5 |
| cspa family cold shock protein | B0O44_101334 | Not Available | Negative | 409128 - 409334 | 7426.67 |
| ymgg-like glycine-zipper protein | B0O44_101335 | Not Available | Positive | 409805 - 410272 | 16356.1 |
| acetyltransferase (gnat) family protein | B0O44_101336 | Not Available | Negative | 410338 - 410871 | 19894.3 |
| hypothetical protein | B0O44_101337 | Not Available | Positive | 411079 - 411462 | 14507.5 |
| response regulator receiver domain-containing protein | B0O44_101338 | Not Available | Positive | 411532 - 412032 | 18999.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

