Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dha1 family arabinose polymer transporter-like mfs transporter | B0O44_10623 | Not Available | Negative | 3841537 - 3842712 | 41191.1 |
| outer membrane protein with beta-barrel domain | B0O44_10624 | Not Available | Positive | 3842945 - 3843631 | 23428.8 |
| hypothetical protein | B0O44_10625 | Not Available | Negative | 3843685 - 3844731 | 39986.2 |
| transcriptional regulator glxa family with amidase domain | B0O44_10626 | Not Available | Negative | 3844762 - 3845727 | 36379.7 |
| hypothetical protein | B0O44_10627 | Not Available | Negative | 3846067 - 3846570 | 19515.2 |
| arac-like dna-binding protein | B0O44_10628 | Not Available | Positive | 3846713 - 3847582 | 33369.5 |
| siderophore-interacting protein | B0O44_10629 | Not Available | Positive | 3847657 - 3848343 | 26168.4 |
| putative nbd/hsp70 family sugar kinase | B0O44_10630 | Not Available | Positive | 3848482 - 3849660 | 42334.6 |
| tonb-linked susc/raga family outer membrane protein | B0O44_10631 | Not Available | Positive | 3849754 - 3852891 | 114469.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_10632 | Not Available | Positive | 3852904 - 3854814 | 71578.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

