Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase small subunit | B0O44_10613 | Not Available | Negative | 3826612 - 3827724 | 41071.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | B0O44_10614 | Not Available | Positive | 3828114 - 3828929 | 29475.8 |
| rlua family pseudouridine synthase | B0O44_10615 | Not Available | Positive | 3828929 - 3829615 | 26038.5 |
| hypothetical protein | B0O44_10616 | Not Available | Negative | 3829619 - 3830089 | 17569.3 |
| glucosylceramidase | B0O44_10617 | Not Available | Negative | 3830237 - 3831646 | 51335.6 |
| beta-glucosidase | B0O44_10618 | Not Available | Negative | 3831690 - 3833990 | 84721.0 |
| putative outer membrane starch-binding protein | B0O44_10619 | Not Available | Negative | 3834046 - 3835461 | 52374.7 |
| tonb-linked susc/raga family outer membrane protein | B0O44_10620 | Not Available | Negative | 3835473 - 3838379 | 105851.0 |
| 7tmr-dism extracellular protein 2 | B0O44_10621 | Not Available | Negative | 3838684 - 3840591 | 74900.1 |
| beta-lactamase class a | B0O44_10622 | Not Available | Negative | 3840605 - 3841504 | 32777.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

