Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_1063 | Not Available | Positive | 3816542 - 3818623 | 77915.0 |
| putative membrane protein yeih | B0O44_1064 | Not Available | Positive | 3818633 - 3819244 | 22343.4 |
| cell division protein ftsb | B0O44_1065 | Not Available | Negative | 3819251 - 3819550 | 12029.4 |
| outer membrane protein with beta-barrel domain | B0O44_1066 | Not Available | Positive | 3819768 - 3820331 | 19675.3 |
| histidine kinase | B0O44_1067 | Not Available | Positive | 3820418 - 3821521 | 42843.9 |
| lyttr family two component transcriptional regulator | B0O44_1068 | Not Available | Positive | 3821518 - 3822273 | 29252.2 |
| enolase | B0O44_1069 | Not Available | Negative | 3822333 - 3823628 | 46361.0 |
| mip family channel protein | B0O44_10610 | Not Available | Negative | 3823847 - 3824539 | 23392.0 |
| abc-2 type transport system permease protein | B0O44_10611 | Not Available | Negative | 3824643 - 3825734 | 39371.1 |
| abc-2 type transport system atp-binding protein | B0O44_10612 | Not Available | Negative | 3825745 - 3826512 | 28379.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

