Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like dna-binding protein | B0O44_105378 | Not Available | Negative | 3802979 - 3803863 | 34123.6 |
| peptidoglycan/lps o-acetylase oafa/yrhl | B0O44_105379 | Not Available | Positive | 3803971 - 3805098 | 42521.1 |
| had superfamily hydrolase (tigr01509 family) | B0O44_105380 | Not Available | Positive | 3805091 - 3805753 | 24105.4 |
| abc-type antimicrobial peptide transport system permease subunit | B0O44_105381 | Not Available | Negative | 3805740 - 3808112 | 87930.4 |
| signal transduction histidine kinase | B0O44_105382 | Not Available | Negative | 3808277 - 3810190 | 72153.6 |
| luxr family two component transcriptional regulator | B0O44_105383 | Not Available | Negative | 3810296 - 3810928 | 23995.5 |
| hypothetical protein | B0O44_105384 | Not Available | Positive | 3811531 - 3811749 | 8291.14 |
| putative repeat protein (tigr01451 family) | B0O44_105385 | Not Available | Positive | 3811992 - 3814888 | 100389.0 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | B0O44_1061 | Not Available | Positive | 3814951 - 3815694 | 26464.0 |
| l,d-transpeptidase-like protein | B0O44_1062 | Not Available | Negative | 3815701 - 3816435 | 27746.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

