Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cubico group peptidase (beta-lactamase class c family) | B0O44_105368 | Not Available | Positive | 3789558 - 3790727 | 43927.0 |
| hypothetical protein | B0O44_105369 | Not Available | Negative | 3790810 - 3791712 | 34309.4 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_105370 | Not Available | Negative | 3791848 - 3793428 | 60381.0 |
| thioredoxin-related protein | B0O44_105371 | Not Available | Positive | 3793867 - 3795102 | 46646.0 |
| hypothetical protein | B0O44_105372 | Not Available | Negative | 3795204 - 3795566 | 13803.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_105373 | Not Available | Positive | 3795932 - 3796531 | 23552.5 |
| fecr family protein | B0O44_105374 | Not Available | Positive | 3796578 - 3797699 | 42174.0 |
| tonb-dependent receptor-like protein | B0O44_105375 | Not Available | Positive | 3797877 - 3801125 | 120982.0 |
| hypothetical protein | B0O44_105376 | Not Available | Positive | 3801133 - 3801933 | 29373.4 |
| hypothetical protein | B0O44_105377 | Not Available | Negative | 3802247 - 3802666 | 16244.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

