Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_105358 | Not Available | Positive | 3782684 - 3783184 | 18893.5 |
| hypothetical protein | B0O44_105359 | Not Available | Negative | 3783335 - 3783550 | 8145.73 |
| hypothetical protein | B0O44_105360 | Not Available | Negative | 3783582 - 3783848 | 10230.9 |
| hypothetical protein | B0O44_105361 | Not Available | Negative | 3784221 - 3784427 | 8093.0 |
| rimj/riml family protein n-acetyltransferase | B0O44_105362 | Not Available | Positive | 3784662 - 3785228 | 21977.4 |
| hypothetical protein | B0O44_105363 | Not Available | Positive | 3785485 - 3785955 | 18211.9 |
| exonuclease iii | B0O44_105364 | Not Available | Positive | 3786057 - 3787565 | 56808.8 |
| agmatine deiminase | B0O44_105365 | Not Available | Positive | 3787596 - 3788708 | 41772.6 |
| hypothetical protein | B0O44_105366 | Not Available | Positive | 3788769 - 3788912 | 5396.55 |
| hypothetical protein | B0O44_105367 | Not Available | Negative | 3788913 - 3789404 | 19337.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

