Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative purr-regulated permease perm | B0O44_105338 | Not Available | Negative | 3761879 - 3763018 | 41941.3 |
| trna modification gtpase | B0O44_105339 | Not Available | Positive | 3763105 - 3764475 | 50067.3 |
| outer membrane receptor protein involved in fe transport | B0O44_105340 | Not Available | Negative | 3764733 - 3767180 | 91566.1 |
| uncharacterized protein upf0014 | B0O44_105341 | Not Available | Positive | 3767379 - 3768503 | 43137.4 |
| lyttr family two component transcriptional regulator | B0O44_105342 | Not Available | Positive | 3768472 - 3769176 | 26760.8 |
| uncharacterized protein duf1579 | B0O44_105343 | Not Available | Negative | 3769392 - 3769844 | 17926.0 |
| hypothetical protein | B0O44_105344 | Not Available | Negative | 3770175 - 3770561 | 14557.0 |
| hypothetical protein | B0O44_105345 | Not Available | Positive | 3770835 - 3774296 | 127851.0 |
| rhs repeat-associated protein | B0O44_105346 | Not Available | Positive | 3774308 - 3777700 | 123427.0 |
| hypothetical protein | B0O44_105347 | Not Available | Positive | 3777697 - 3777888 | 7469.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

