Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase | B0O44_105328 | Not Available | Positive | 3747621 - 3749018 | 51127.4 |
| acyl-coa thioester hydrolase | B0O44_105329 | Not Available | Negative | 3749090 - 3749521 | 16660.0 |
| hsp20 family protein | B0O44_105330 | Not Available | Positive | 3749666 - 3750097 | 16402.2 |
| outer membrane receptor protein involved in fe transport | B0O44_105331 | Not Available | Negative | 3750963 - 3753611 | 96080.9 |
| alpha,alpha-trehalase | B0O44_105332 | Not Available | Negative | 3753684 - 3755177 | 56803.2 |
| fucose permease | B0O44_105333 | Not Available | Negative | 3755167 - 3756417 | 45436.0 |
| arac-like dna-binding protein | B0O44_105334 | Not Available | Positive | 3756587 - 3757432 | 33111.1 |
| arginine decarboxylase | B0O44_105335 | Not Available | Negative | 3757613 - 3759004 | 54013.4 |
| arginase | B0O44_105336 | Not Available | Positive | 3759106 - 3760056 | 35048.1 |
| arginyl-trna synthetase | B0O44_105337 | Not Available | Positive | 3760060 - 3761838 | 66302.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

