Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family two component transcriptional regulator | B0O44_105318 | Not Available | Negative | 3738768 - 3739523 | 29145.7 |
| histidine kinase | B0O44_105319 | Not Available | Negative | 3739516 - 3740598 | 41234.8 |
| hypothetical protein | B0O44_105320 | Not Available | Positive | 3740660 - 3740782 | 4632.76 |
| phosphoglucomutase | B0O44_105321 | Not Available | Negative | 3740793 - 3742526 | 63719.8 |
| aspartate kinase | B0O44_105322 | Not Available | Positive | 3742771 - 3744084 | 48524.6 |
| hypothetical protein | B0O44_105323 | Not Available | Negative | 3744089 - 3744265 | 7154.17 |
| diaminopimelate decarboxylase | B0O44_105324 | Not Available | Positive | 3744267 - 3745424 | 43080.3 |
| uncharacterized protein yndb with ahsa1/start domain | B0O44_105325 | Not Available | Negative | 3745469 - 3745852 | 14633.0 |
| glutaryl-coa dehydrogenase | B0O44_105326 | Not Available | Negative | 3745858 - 3747048 | 43672.7 |
| dihydroneopterin aldolase | B0O44_105327 | Not Available | Positive | 3747216 - 3747575 | 13759.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

