Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper chaperone | B0O44_101319 | Not Available | Positive | 392897 - 393103 | 7398.94 |
| arac-like dna-binding protein | B0O44_101320 | Not Available | Positive | 393126 - 393671 | 20574.7 |
| acyl-coa hydrolase | B0O44_101321 | Not Available | Negative | 393664 - 394941 | 46248.8 |
| hypothetical protein | B0O44_101322 | Not Available | Positive | 395120 - 396673 | 59140.6 |
| had superfamily hydrolase (tigr01509 family)/had superfamily hydrolase (tigr01549 family) | B0O44_101323 | Not Available | Positive | 396704 - 397360 | 24810.7 |
| dihydrolipoamide dehydrogenase | B0O44_101324 | Not Available | Positive | 397407 - 398792 | 50561.8 |
| osmoprotectant transport system atp-binding protein | B0O44_101325 | Not Available | Positive | 398785 - 399612 | 31144.2 |
| osmoprotectant transport system permease protein | B0O44_101326 | Not Available | Positive | 399614 - 401182 | 57622.7 |
| ergothioneine biosynthesis protein egtb | B0O44_101327 | Not Available | Positive | 401185 - 402342 | 45019.2 |
| dimethylhistidine n-methyltransferase | B0O44_101328 | Not Available | Positive | 402342 - 403292 | 36341.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

