Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tfox-like protein | B0O44_105287 | Not Available | Negative | 3708268 - 3708612 | 13530.5 |
| hypothetical protein | B0O44_105288 | Not Available | Negative | 3709173 - 3709670 | 19853.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | B0O44_105289 | Not Available | Positive | 3709862 - 3711325 | 54144.9 |
| peroxiredoxin | B0O44_105290 | Not Available | Positive | 3711332 - 3712456 | 41785.1 |
| two-component system alkaline phosphatase synthesis response regulator phop | B0O44_105291 | Not Available | Positive | 3712562 - 3713251 | 25978.6 |
| rlua family pseudouridine synthase | B0O44_105292 | Not Available | Positive | 3713281 - 3714003 | 27584.3 |
| cic family chloride channel protein | B0O44_105293 | Not Available | Positive | 3714015 - 3715802 | 65548.1 |
| dna-binding ntrc family response regulator | B0O44_105294 | Not Available | Negative | 3715837 - 3717240 | 52364.6 |
| cbb3-type cytochrome c oxidase subunit iii | B0O44_105296 | Not Available | Negative | 3717737 - 3718159 | 15646.0 |
| protein sco1/2 | B0O44_105297 | Not Available | Negative | 3718162 - 3718812 | 25023.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

