Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerol transferase mdob-like alkp superfamily enzyme | B0O44_105277 | Not Available | Negative | 3694285 - 3696150 | 70924.7 |
| uncharacterized protein duf4412 | B0O44_105278 | Not Available | Negative | 3696157 - 3696834 | 24537.6 |
| methylglutaconyl-coa hydratase | B0O44_105279 | Not Available | Negative | 3696850 - 3697629 | 28594.4 |
| competence protein comec | B0O44_105280 | Not Available | Negative | 3697658 - 3699448 | 68475.7 |
| helix-hairpin-helix protein | B0O44_105281 | Not Available | Negative | 3699451 - 3701514 | 79103.4 |
| dna-binding transcriptional merr regulator | B0O44_105282 | Not Available | Negative | 3701571 - 3701906 | 13102.9 |
| alanyl-trna synthetase | B0O44_105283 | Not Available | Positive | 3702023 - 3704722 | 101376.0 |
| tonb family protein | B0O44_105284 | Not Available | Positive | 3704841 - 3705824 | 37522.5 |
| histidine decarboxylase | B0O44_105285 | Not Available | Negative | 3705879 - 3707015 | 42659.1 |
| fecr family protein | B0O44_105286 | Not Available | Positive | 3707198 - 3708259 | 39715.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

