Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | B0O44_105267 | Not Available | Negative | 3684255 - 3684932 | 25456.8 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | B0O44_105268 | Not Available | Negative | 3685046 - 3686095 | 39963.0 |
| putative abc transport system permease protein | B0O44_105269 | Not Available | Positive | 3686277 - 3687524 | 46105.3 |
| aspartate aminotransferase | B0O44_105270 | Not Available | Negative | 3687594 - 3688790 | 43804.4 |
| cation diffusion facilitator family transporter | B0O44_105271 | Not Available | Positive | 3688981 - 3689904 | 34099.3 |
| adp-ribose pyrophosphatase yjhb (nudix family) | B0O44_105272 | Not Available | Positive | 3689901 - 3690341 | 16994.1 |
| hypothetical protein | B0O44_105273 | Not Available | Positive | 3690528 - 3690704 | 6558.06 |
| lrp/asnc family leucine-responsive transcriptional regulator/lrp/asnc family transcriptional regulator | B0O44_105274 | Not Available | Negative | 3690657 - 3691172 | 19822.5 |
| hypothetical protein | B0O44_105275 | Not Available | Positive | 3691359 - 3692075 | 27107.2 |
| dipeptidyl-peptidase-4 | B0O44_105276 | Not Available | Negative | 3692109 - 3694283 | 81841.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

