Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B0O44_105257 | Not Available | Negative | 3678202 - 3678735 | 20631.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | B0O44_105258 | Not Available | Negative | 3678780 - 3679505 | 27234.6 |
| deoxyadenosine/deoxycytidine kinase | B0O44_105259 | Not Available | Negative | 3679507 - 3680121 | 23882.5 |
| tryptophanyl-trna synthetase | B0O44_105260 | Not Available | Negative | 3680181 - 3681179 | 37796.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | B0O44_105261 | Not Available | Positive | 3681257 - 3681988 | 28451.1 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | B0O44_105262 | Not Available | Positive | 3681989 - 3682279 | 11146.4 |
| putative abc transport system atp-binding protein | B0O44_105263 | Not Available | Positive | 3682328 - 3683086 | 27733.3 |
| cob(i)alamin adenosyltransferase | B0O44_105264 | Not Available | Positive | 3683093 - 3683641 | 20881.4 |
| uncharacterized protein duf2795 | B0O44_105265 | Not Available | Positive | 3683726 - 3683947 | 8587.66 |
| hypothetical protein | B0O44_105266 | Not Available | Positive | 3684075 - 3684233 | 5616.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

