Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit epsilon | B0O44_105247 | Not Available | Negative | 3665386 - 3666768 | 51766.2 |
| putative redox protein | B0O44_105248 | Not Available | Negative | 3666822 - 3667232 | 15097.3 |
| uncharacterized protein (tigr00369 family) | B0O44_105249 | Not Available | Positive | 3667274 - 3667714 | 16330.8 |
| hypothetical protein | B0O44_105250 | Not Available | Positive | 3667817 - 3668068 | 9589.31 |
| spore maturation protein spma | B0O44_105251 | Not Available | Negative | 3668080 - 3669351 | 45129.7 |
| zinc carboxypeptidase | B0O44_105252 | Not Available | Negative | 3669380 - 3670549 | 44451.4 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | B0O44_105253 | Not Available | Negative | 3670635 - 3673472 | 106186.0 |
| outer membrane protein with beta-barrel domain | B0O44_105254 | Not Available | Negative | 3673569 - 3674147 | 21413.5 |
| yidc/oxa1 family membrane protein insertase | B0O44_105255 | Not Available | Negative | 3674255 - 3676054 | 68311.2 |
| ctp synthase | B0O44_105256 | Not Available | Negative | 3676072 - 3677691 | 60062.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

