Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kup system potassium uptake protein | B0O44_105227 | Not Available | Positive | 3642363 - 3644300 | 72418.2 |
| helix-turn-helix protein | B0O44_105228 | Not Available | Negative | 3644294 - 3645091 | 30821.3 |
| outer membrane protein tolc | B0O44_105229 | Not Available | Positive | 3645175 - 3646500 | 50940.0 |
| membrane fusion protein (multidrug efflux system) | B0O44_105230 | Not Available | Positive | 3646502 - 3647563 | 39695.4 |
| mfs transporter | B0O44_105231 | Not Available | Positive | 3647560 - 3649155 | 60713.1 |
| muramoyltetrapeptide carboxypeptidase | B0O44_105232 | Not Available | Positive | 3649247 - 3650281 | 37895.8 |
| mannonate dehydratase | B0O44_105233 | Not Available | Positive | 3650396 - 3651571 | 44162.0 |
| hypothetical protein | B0O44_105234 | Not Available | Positive | 3652043 - 3652222 | 6471.77 |
| dna polymerase-4 | B0O44_105235 | Not Available | Positive | 3652255 - 3653403 | 42905.8 |
| dna-binding response ompr family regulator | B0O44_105236 | Not Available | Positive | 3653518 - 3654204 | 26095.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

