Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system substrate-binding protein | B0O44_101309 | Not Available | Positive | 381046 - 381990 | 35226.8 |
| carboxypeptidase-like protein | B0O44_101310 | Not Available | Negative | 381980 - 383740 | 63663.1 |
| fecr family protein | B0O44_101311 | Not Available | Negative | 383737 - 384711 | 36634.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_101312 | Not Available | Negative | 384713 - 385297 | 23263.2 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | B0O44_101313 | Not Available | Negative | 385412 - 386902 | 58083.3 |
| hypothetical protein | B0O44_101314 | Not Available | Negative | 386914 - 387159 | 9270.26 |
| hypothetical protein | B0O44_101315 | Not Available | Negative | 387185 - 388309 | 39165.9 |
| dna-binding transcriptional lysr family regulator | B0O44_101316 | Not Available | Positive | 388413 - 389309 | 33770.3 |
| putative integral membrane protein (tigr00698 family) | B0O44_101317 | Not Available | Positive | 389380 - 390321 | 33607.7 |
| cu2+-exporting atpase | B0O44_101318 | Not Available | Positive | 390644 - 392866 | 79299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

