Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase specialized sigma24 family protein | B0O44_105187 | Not Available | Negative | 3604388 - 3604954 | 21531.2 |
| acetyltransferase (gnat) family protein | B0O44_105188 | Not Available | Negative | 3605061 - 3605615 | 21200.3 |
| hypothetical protein | B0O44_105189 | Not Available | Positive | 3605983 - 3606459 | 18603.6 |
| putative dehydrogenase | B0O44_105190 | Not Available | Positive | 3606592 - 3607614 | 37783.7 |
| protein-tyrosine phosphatase | B0O44_105191 | Not Available | Positive | 3607625 - 3608062 | 16629.8 |
| fusaric acid resistance family protein | B0O44_105192 | Not Available | Positive | 3608064 - 3608585 | 19553.6 |
| hypothetical protein | B0O44_105193 | Not Available | Negative | 3608523 - 3609014 | 17900.8 |
| uncharacterized protein ydhg (yjbr/cyay superfamily) | B0O44_105194 | Not Available | Negative | 3609120 - 3609464 | 12795.5 |
| hypothetical protein | B0O44_105195 | Not Available | Positive | 3609593 - 3610420 | 31281.3 |
| uncharacterized protein duf3667 | B0O44_105196 | Not Available | Positive | 3610589 - 3611299 | 27058.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

