Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | B0O44_105177 | Not Available | Positive | 3595391 - 3596413 | 39227.7 |
| tonb-linked susc/raga family outer membrane protein | B0O44_105178 | Not Available | Positive | 3596485 - 3599799 | 121761.0 |
| susd-like starch-binding protein associating with outer membrane | B0O44_105179 | Not Available | Positive | 3599807 - 3601402 | 58722.4 |
| hypothetical protein | B0O44_105180 | Not Available | Positive | 3601427 - 3601867 | 16359.7 |
| hypothetical protein | B0O44_105181 | Not Available | Positive | 3601980 - 3602171 | 7102.39 |
| hypothetical protein | B0O44_105182 | Not Available | Positive | 3602301 - 3602504 | 7742.08 |
| hth-type transcriptional regulator/antitoxin higa | B0O44_105183 | Not Available | Negative | 3602547 - 3602933 | 14200.5 |
| mrna interferase higb | B0O44_105184 | Not Available | Negative | 3602944 - 3603237 | 11615.9 |
| atp-dependent clp protease protease subunit | B0O44_105185 | Not Available | Negative | 3603362 - 3604057 | 25507.7 |
| hypothetical protein | B0O44_105186 | Not Available | Negative | 3604138 - 3604407 | 10804.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

