Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | B0O44_105167 | Not Available | Positive | 3578776 - 3580086 | 49738.0 |
| tetr family transcriptional regulator | B0O44_105168 | Not Available | Positive | 3580128 - 3580781 | 25404.7 |
| outer membrane protein tolc | B0O44_105169 | Not Available | Positive | 3580911 - 3582254 | 50342.5 |
| rnd family efflux transporter mfp subunit | B0O44_105170 | Not Available | Positive | 3582261 - 3583304 | 37451.9 |
| multidrug efflux pump subunit acrb | B0O44_105171 | Not Available | Positive | 3583321 - 3586371 | 111341.0 |
| glycosyl hydrolase family 18 (putative chitinase) | B0O44_105172 | Not Available | Negative | 3586446 - 3587414 | 34021.0 |
| putative alpha-1,2-mannosidase | B0O44_105173 | Not Available | Negative | 3587443 - 3589635 | 82148.9 |
| susd/ragb-like outer membrane lipoprotein | B0O44_105174 | Not Available | Negative | 3589709 - 3591340 | 60179.1 |
| tonb-linked susc/raga family outer membrane protein | B0O44_105175 | Not Available | Negative | 3591358 - 3594567 | 117009.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | B0O44_105176 | Not Available | Positive | 3594684 - 3595328 | 25227.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

