Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | B0O44_105157 | Not Available | Negative | 3565127 - 3566194 | 41266.2 |
| hypothetical protein | B0O44_105158 | Not Available | Positive | 3566564 - 3567310 | 27835.2 |
| hypothetical protein | B0O44_105159 | Not Available | Negative | 3567451 - 3568767 | 50100.4 |
| hypothetical protein | B0O44_105160 | Not Available | Negative | 3568777 - 3569178 | 15359.9 |
| cubico group peptidase (beta-lactamase class c family) | B0O44_105161 | Not Available | Negative | 3569313 - 3570827 | 57318.2 |
| Trna-pro | Not Available | Not Available | Positive | 3571075 - 3571148 | Not Available |
| tetratricopeptide repeat protein | B0O44_105163 | Not Available | Positive | 3571594 - 3573237 | 63830.7 |
| tonb-dependent receptor | B0O44_105164 | Not Available | Positive | 3573509 - 3576235 | 102351.0 |
| hypothetical protein | B0O44_105165 | Not Available | Positive | 3576287 - 3577540 | 44928.2 |
| 3-phytase | B0O44_105166 | Not Available | Positive | 3577565 - 3578617 | 38591.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

