Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | B0O44_105147 | Not Available | Positive | 3551489 - 3553279 | 67192.2 |
| hypothetical protein | B0O44_105148 | Not Available | Positive | 3553279 - 3555018 | 66786.0 |
| beta-glucosidase | B0O44_105149 | Not Available | Positive | 3555045 - 3557480 | 90514.5 |
| fe-mn family superoxide dismutase | B0O44_105150 | Not Available | Positive | 3557625 - 3558362 | 27627.6 |
| hypothetical protein | B0O44_105151 | Not Available | Negative | 3558436 - 3558858 | 15522.8 |
| mechanosensitive ion channel-like protein | B0O44_105152 | Not Available | Positive | 3559184 - 3561529 | 88965.1 |
| putative glyoxalase superfamily protein phnb | B0O44_105153 | Not Available | Negative | 3561557 - 3561922 | 13518.0 |
| putative mg2+ transporter-c (mgtc) family protein | B0O44_105154 | Not Available | Positive | 3562175 - 3562873 | 24936.3 |
| tricorn protease-like protein | B0O44_105155 | Not Available | Positive | 3562950 - 3564341 | 53199.9 |
| lyttr family two component transcriptional regulator | B0O44_105156 | Not Available | Negative | 3564360 - 3565127 | 29636.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

