Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor protein involved in fe transport | B0O44_105127 | Not Available | Positive | 3526060 - 3528504 | 90289.2 |
| hypothetical protein | B0O44_105128 | Not Available | Negative | 3528540 - 3530066 | 56775.2 |
| rhamnogalacturonyl hydrolase yesr | B0O44_105129 | Not Available | Positive | 3530307 - 3531440 | 42246.8 |
| fhs family l-fucose permease-like mfs transporter | B0O44_105130 | Not Available | Positive | 3531592 - 3532788 | 43622.5 |
| l-rhamnose mutarotase | B0O44_105131 | Not Available | Positive | 3532809 - 3533138 | 13029.8 |
| altronate hydrolase | B0O44_105132 | Not Available | Positive | 3533142 - 3534806 | 59629.4 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | B0O44_105133 | Not Available | Positive | 3534817 - 3535581 | 26849.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | B0O44_105134 | Not Available | Positive | 3535628 - 3536485 | 31526.7 |
| l-fuconolactonase | B0O44_105135 | Not Available | Positive | 3536472 - 3537308 | 32584.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase/l-fucose dehydrogenase | B0O44_105136 | Not Available | Positive | 3537310 - 3538098 | 28499.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

