Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nutrimenti |
| Strain | strain DSM 27372 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1672028 bp
Thymine Count
1662865 bp
Guanine Count
1202051 bp
Cytosine Count
1178159 bp
Genome Length
5716991 bp
Protein-coding Genes
4924 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp-like camp-binding protein | B0O44_101298 | Not Available | Negative | 368638 - 369201 | 21699.5 |
| ppk2 family polyphosphate:nucleotide phosphotransferase | B0O44_101299 | Not Available | Positive | 369446 - 370327 | 34208.7 |
| beta-lactamase family protein | B0O44_101300 | Not Available | Negative | 370333 - 371535 | 46336.6 |
| outer membrane cobalamin receptor | B0O44_101302 | Not Available | Positive | 371910 - 373967 | 78544.2 |
| hypothetical protein | B0O44_101303 | Not Available | Positive | 373957 - 375117 | 43609.4 |
| hypothetical protein | B0O44_101304 | Not Available | Positive | 375151 - 376296 | 42134.3 |
| hypothetical protein | B0O44_101305 | Not Available | Positive | 376313 - 377266 | 34832.7 |
| uncharacterized protein duf5074 | B0O44_101306 | Not Available | Positive | 377285 - 378382 | 39809.1 |
| vitamin b12 transporter | B0O44_101307 | Not Available | Positive | 378458 - 380329 | 68726.9 |
| hypothetical protein | B0O44_101308 | Not Available | Positive | 380371 - 380958 | 21503.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

